Yeah, just as Daniel said, R401/R413/R408 are 0.001Ohm but these is not ideal for measurement.
So e.g. my Hikey960 board is reworked to replace the original 0.001Ohm resistors with below shunt resistors (actually credits to my colleague for beautiful reworking ) :
For the 4.2V VDD voltage domain (R408): 0.33 Ohms
For the 12V DCin voltage domain (R401): 0.1 Ohms
For the 5V SYS voltage domain (R413): 0.82 Ohms
Below is related AEP configure file which I use AEP tool with my Hikey960 board  and suggest you could go through the detailed usage for the doc . As Daniel suggested, except these three measurement points, you also could measure energy by using the power jack (and without rework the board).
# arm-probe configuration file
# setup name
# <device path>
DCIN 0.082000 1 -0.014612 0.165300 -0.000231 0.000507 0 Main VBAT #ff0000 SoC
VDD 0.033000 2 -0.017479 0.167072 -0.000312 0.000983 0 VDD_4V2 DCIN #ff0000 SoC
SYS 0.100000 3 -0.016781 0.162839 -0.000274 0.000776 0 SYS_5V DCIN #ff0000 SoC